Index

C

calcil module calcil.data_utils module calcil.dataclasses module calcil.forward module calcil.loss module calcil.phantom module

calcil.physics module calcil.physics.wave_optics module calcil.reconstruction module calcil.signal module cart2Pol() (in module calcil.physics.wave_optics) checkpoint_every (calcil.reconstruction.ReconIterParameters attribute)

D

dataclass() (in module calcil.dataclasses)

delay_update_n_iter (calcil.reconstruction.ReconVarParameters attribute)

F

fftconvolve() (in module calcil.signal)

forward() (calcil.forward.Model method)

G

generate_nested_dict_keys() (in module calcil.reconstruction) generate_shepp_logan() (in module calcil.phantom) genGrid() (in module calcil.physics.wave_optics) genGridNumpy() (in module calcil.physics.wave_optics) genPupil() (in module calcil.physics.wave_optics)

genPupilNumpy() (in module calcil.physics.wave_optics) get_dataclass_instances() (in module calcil.dataclasses) get_l2_loss() (in module calcil.loss) get_loss_fn() (calcil.loss.Loss method) get_weight_l2_reg() (in module calcil.loss)

K

keep_checkpoints (calcil.reconstruction.ReconIterParameters attribute)

L

load_checkpoint_and_output() (in module calcil.reconstruction) load_tensorboard_log() (in module calcil.reconstruction) loader_from_numpy() (in module calcil.data_utils) log_every (calcil.reconstruction.ReconIterParameters attribute)

log_intermediate() (calcil.forward.Model method) log_max_imgs (calcil.reconstruction.ReconIterParameters attribute) Loss (class in calcil.loss) loss_fn_checker() (in module calcil.loss) lr (calcil.reconstruction.ReconVarParameters attribute)

M

Model (class in calcil.forward) model_hyperparams() (calcil.forward.Model method) model_save() (calcil.forward.Model method) module calcil calcil.data_utils calcil.dataclasses calcil.forward calcil.loss calcil.phantom calcil.physics calcil.physics.wave_optics calcil.reconstruction calcil.signal

N

n_epoch (calcil.reconstruction.ReconIterParameters attribute)

name (calcil.forward.Model attribute)

O

opt (calcil.reconstruction.ReconVarParameters attribute)

opt_kwargs (calcil.reconstruction.ReconVarParameters attribute) output_every (calcil.reconstruction.ReconIterParameters attribute)

P

parent (calcil.forward.Model attribute)

propKernel() (in module calcil.physics.wave_optics) propKernelNumpy() (in module calcil.physics.wave_optics)

R

ReconIterParameters (class in calcil.reconstruction) reconstruct_multivars_sgd() (in module calcil.reconstruction) reconstruct_sgd() (in module calcil.reconstruction) ReconVarParameters (class in calcil.reconstruction)

recover_from_hyperparams() (calcil.forward.Model class method) register_dataclass_instance() (in module calcil.dataclasses) reset_dataclass_instances() (in module calcil.dataclasses) run_reconstruction() (in module calcil.reconstruction)

S

save_dir (calcil.reconstruction.ReconIterParameters attribute) schedule (calcil.reconstruction.ReconVarParameters attribute)

schedule_kwargs (calcil.reconstruction.ReconVarParameters attribute) scope (calcil.forward.Model attribute)

T

tfds_files_loader() (in module calcil.data_utils)

U

update_every (calcil.reconstruction.ReconVarParameters attribute)

update_iter_sgd() (in module calcil.reconstruction)

V

var() (calcil.forward.Model method) var_find() (calcil.forward.Model method)

var_list() (in module calcil.forward) var_replace() (in module calcil.forward) var_verify() (calcil.forward.Model method)

Z

zernikePolynomial() (in module calcil.physics.wave_optics)